../netMHCIIpan -inptype 1 -f example.pep > example.pep.out
../netMHCIIpan -inptype 1 -f example.pep_context -context > example.pep_context.out

../netMHCIIpan -inptype 0 -f example.fsa > example.fsa.out
../netMHCIIpan -inptype 0 -f example.fsa -context -termAcon > example.fsa_context.out
../netMHCIIpan -f example.fsa -s -u > example.fsa.sorted.out

../netMHCIIpan -f example.fsa -hlaseqA DQA1_0101.fsa -hlaseq DQB1_0201.fsa > example.fsa_hlaseq_A+B.out
